BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB038F01LP1|AL430567
(928 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1241 1829 0.0
>3x_Contig1241
Length = 5349
Score = 1829 bits (922), Expect = 0.0
Identities = 926/928 (99%)
Strand = Plus / Minus
Query: 1 gatctgaggttggaaaaggtttagcattttcttgccactcattggtgagactttgaacca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2313 gatctgaggttggaaaaggtttagcattttcttgccactcattggtgagactttgaacca 2254
Query: 61 gtaccagaatgtaattctcatggactcccttatggttgtctgagcgtctgttaacccttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2253 gtaccagaatgtaattctcatggactcccttatggttgtctgagcgtctgttaacccttt 2194
Query: 121 ttgcaaccattcctcgacgtagacatgatgttgcgatatcaacctcttatggaaccttac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2193 ttgcaaccattcctcgacgtagacatgatgttgcgatatcaacctcttatggaaccttac 2134
Query: 181 tattagaattctgaggaaagtggaagaatatagccttgatacgttatttttatctctgat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2133 tattagaattctgaggaaagtggaagaatatagccttgatacgttatttttatctctgat 2074
Query: 241 taacgcaaaamagtgattgaatagtcgtgaatggaatgggacagtagatagtaacgttat 300
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2073 taacgcaaaacagtgattgaatagtcgtgaatggaatgggacagtagatagtaacgttat 2014
Query: 301 gagaaaaataaacgcattttgattggcgattttcttggtatttgacatcaatttggcaag 360
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2013 gagacaaataaacgcattttgattggcgattttcttggtatttgacatcaatttggcaag 1954
Query: 361 gcatgaccaaaggttttcgataattgagatatccaacatggaattgaaaacacagcaaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1953 gcatgaccaaaggttttcgataattgagatatccaacatggaattgaaaacacagcaaag 1894
Query: 421 gtctttcaccaagctgcaaccgtgggtacaaagagaagttcttaacgaaagggccgattt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1893 gtctttcaccaagctgcaaccgtgggtacaaagagaagttcttaacgaaagggccgattt 1834
Query: 481 agtgacgcagtattgtaaatttagatctttccatagttctaaaaatttgtccgggaattc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1833 agtgacgcagtattgtaaatttagatctttccatagttctaaaaatttgtccgggaattc 1774
Query: 541 aatggaaacgtttcctaagacaatggatcgaagtttggtaacatttgtctgtctaatttt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1773 aatggaaacgtttcctaagacaatggatcgaagtttggtaacatttgtctgtctaatttt 1714
Query: 601 ccaattctgttctgtttcccttgaaccttcaaacgctggtagcattgactccaaatcttt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1713 ccaattctgttctgtttcccttgaaccttcaaacgctggtagcattgactccaaatcttt 1654
Query: 661 tataagataactcaagttgctgtatgagattggctctggggcaggtaccgtgggaaattg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1653 tataagataactcaagttgctgtatgagattggctctggggcaggtaccgtgggaaattg 1594
Query: 721 cggcgcctgatgcataatggattgtaattcattttgtaagttgaaaacttgggaattaat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1593 cggcgcctgatgcataatggattgtaattcattttgtaagttgaaaacttgggaattaat 1534
Query: 781 gctatttgtatgggtgatagacctatcaaaatcatctttcatatcgctctcggagccatg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1533 gctatttgtatgggtgatagacctatcaaaatcatctttcatatcgctctcggagccatg 1474
Query: 841 attattaagtttccccaccaaacgagacttgaaaactttcgctgcactttctcgaatcac 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1473 attattaagtttccccaccaaacgagacttgaaaactttcgctgcactttctcgaatcac 1414
Query: 901 tgaatcgaccatacttcgtaccataggc 928
||||||||||||||||||||||||||||
Sbjct: 1413 tgaatcgaccatacttcgtaccataggc 1386
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6741
Number of Sequences: 1807
Number of extensions: 6741
Number of successful extensions: 48
Number of sequences better than 1.0e-20: 1
length of query: 928
length of database: 10,358,551
effective HSP length: 16
effective length of query: 912
effective length of database: 10,329,639
effective search space: 9420630768
effective search space used: 9420630768
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)